Publications

Patent: "US-20240404700-A1: SYSTEM AND METHOD FOR PERSONALIZED TREATMENT PRIORITIZATION" Link
Patent: "US-20240404623-A1: SYSTEM AND METHOD FOR PERSONALIZED INTERPRETATION OF GENETIC VARIANTS" Link
PhD Thesis: "Advancing the understanding and treatment of psychiatric and other complex diseases through machine learning and omics" Link
Qi, Bill, and Yannis J. Trakadis. "Graph Representation Learning for the Prediction of Medication Usage in the UK Biobank Based on Pharmacogenetic Variants." Bioengineering 12.6 (2025): 595. Link
Qi, Bill, and Yannis J Trakadis. "Advancing Clinical Psychiatry: Integration of Clinical and Omics Data Using Machine Learning." Biological psychiatry (2023). Link
Qi, Bill, Sonia Boscenco, Janani Ramamurthy, and Yannis J. Trakadis. "Transcriptomics and machine learning to advance schizophrenia genetics: A case-control study using post-mortem brain data." Computer Methods and Programs in Biomedicine (2021). Link
Trakadis Yannis, Andrea Accogli, Bill Qi, David Bloom, Ridha Joober, Emmanuel Levy, Karim Tabbane. "Next-generation gene panel testing in adolescents and adults in a medical neuropsychiatric genetics clinic." Neurogenetics (2021). Link
Qi, Bill, Janani Ramamurthy, Imane Bennani, and Yannis J. Trakadis. "Machine learning and bioinformatic analysis of brain and blood mRNA profiles in major depressive disorder: A case-control study." American Journal of Medical Genetics Part B: Neuropsychiatric Genetics (2021). Link
Qi, Bill, Kellie MacDonald, Marcelo T. Berlim, Allan Fielding, Eric Lis, Nancy Low, Stéphane Richard-Devantoy et al. "Balance problems, paralysis, and angina as clinical markers for severity in major depression." Frontiers in Psychiatry (2020). Link/
MacDonald, Kellie, Yuting Jiang, Ankur Krishnan, Sameer Sardaar, Bill Qi, Aristotelis Eleftheriadis, Stephen J. Glatt et al. "Patient stratification using metabolomics to address the heterogeneity of psychosis." Schizophrenia Bulletin Open (2020). Link
Qi, Bill, Laura M. Fiori, Gustavo Turecki, and Yannis J. Trakadis. "Machine learning analysis of blood microRNA data in major depression: a case-control study for biomarker discovery." International Journal of Neuropsychopharmacology (2020). Link
Sardaar, Sameer, Bill Qi, Alexandre Dionne-Laporte, Guy A. Rouleau, Reihaneh Rabbany, and Yannis J. Trakadis. "Machine learning analysis of exome trios to contrast the genomic architecture of autism and schizophrenia." BMC psychiatry 20, no. 1 (2020): 1-11. Link
Azar, Marleine, Kira E. Riehm, Nazanin Saadat, Tatiana Sanchez, Matthew Chiovitti, Lin Qi, Danielle B. Rice et al. "Evaluation of Journal Registration Policies and Prospective Registration of Randomized Clinical Trials of Nonregulated Health Care Interventions." JAMA internal medicine (2019). Link
Rice, Danielle B., Lorie A. Kloda, Brooke Levis, Bill Qi, Emily Kingsland, and Brett D. Thombs. "Are MEDLINE searches sufficient for systematic reviews and meta-analyses of the diagnostic accuracy of depression screening tools? A review of meta-analyses." Journal of psychosomatic research 87 (2016): 7-13. Link